PF03548


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03548, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03548
Description Outer membrane lipoprotein carrier protein LolA

Occurence in the database

PF03548 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1221 FBDBKF_07105 89242 89853 1 lolA outer membrane lipoprotein chaperone LolA Morganella morganii S1
1 group_1221 EHELCC_03865 96333 96944 -1 lolA outer membrane lipoprotein chaperone LolA Morganella morganii S2
2 group_1221 NLDBIP_03865 96129 96740 -1 lolA outer membrane lipoprotein chaperone LolA Morganella morganii S4
3 group_1221 LHKJJB_09695 96243 96854 -1 lolA outer membrane lipoprotein chaperone LolA Morganella morganii S3
4 group_1221 HKOGLL_09280 94198 94809 1 lolA outer membrane lipoprotein chaperone LolA Morganella morganii S5
5 group_1221 F4V73_RS01290 277107 277718 1 lolA outer membrane lipoprotein chaperone LolA Morganella psychrotolerans
6 group_1221 PMI_RS03435 762534 763139 1 lolA outer membrane lipoprotein chaperone LolA Proteus mirabilis HI4320