PF03459


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03459, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 20 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03459
Description TOBE domain

Occurence in the database

PF03459 is associated with 20 different proteins (see tab "Protein list" and "Profile")
The 20 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1494 FBDBKF_09645 27819 28886 -1 modC molybdenum ABC transporter ATP-binding protein ModC Morganella morganii S1
1 group_1498 FBDBKF_09670 31590 32375 1 modE molybdenum-dependent transcriptional regulator Morganella morganii S1
2 group_2960 FBDBKF_16165 22522 22950 -1 mopI Molybdopterin-binding protein MopI Morganella morganii S1
3 group_1494 EHELCC_04445 219784 220851 -1 modC molybdenum ABC transporter ATP-binding protein ModC Morganella morganii S2
4 group_1498 EHELCC_04470 223555 224340 1 modE molybdenum-dependent transcriptional regulator Morganella morganii S2
5 group_2960 EHELCC_16200 22522 22950 -1 mopI Molybdopterin-binding protein MopI Morganella morganii S2
6 group_1494 NLDBIP_04445 219580 220647 -1 modC molybdenum ABC transporter ATP-binding protein ModC Morganella morganii S4
7 group_1498 NLDBIP_04470 223351 224136 1 modE molybdenum-dependent transcriptional regulator Morganella morganii S4
8 group_2960 NLDBIP_17140 39220 39648 1 mopI Molybdopterin-binding protein MopI Morganella morganii S4
9 group_1498 LHKJJB_14160 111242 112027 -1 modE molybdenum-dependent transcriptional regulator Morganella morganii S3
10 group_1494 LHKJJB_14185 114731 115798 1 modC molybdenum ABC transporter ATP-binding protein ModC Morganella morganii S3
11 group_2960 LHKJJB_17060 42322 42750 1 mopI Molybdopterin-binding protein MopI Morganella morganii S3
12 group_1494 HKOGLL_12350 28600 29667 -1 modC molybdenum ABC transporter ATP-binding protein ModC Morganella morganii S5
13 group_1498 HKOGLL_12375 32371 33156 1 modE molybdenum-dependent transcriptional regulator Morganella morganii S5
14 group_2960 HKOGLL_16780 22522 22950 -1 mopI Molybdopterin-binding protein MopI Morganella morganii S5
15 group_1498 F4V73_RS00670 140895 141680 -1 modE molybdenum-dependent transcriptional regulator Morganella psychrotolerans
16 group_1494 F4V73_RS00695 144611 145678 1 modC molybdenum ABC transporter ATP-binding protein ModC Morganella psychrotolerans
17 group_2960 F4V73_RS17460 122727 123155 1 TOBE domain-containing protein Morganella psychrotolerans
18 group_1498 PMI_RS02935 647162 647953 -1 modE molybdenum-dependent transcriptional regulator Proteus mirabilis HI4320
19 group_1494 PMI_RS02950 650548 651612 1 modC molybdenum ABC transporter ATP-binding protein ModC Proteus mirabilis HI4320