PF03450


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03450, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03450
Description CO dehydrogenase flavoprotein C-terminal domain

Occurence in the database

PF03450 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2770 FBDBKF_07795 79548 80426 -1 xdhB xanthine dehydrogenase FAD-binding subunit XdhB Morganella morganii S1
1 group_2770 EHELCC_13625 53742 54620 -1 xdhB xanthine dehydrogenase FAD-binding subunit XdhB Morganella morganii S2
2 group_2770 NLDBIP_14070 74617 75495 -1 xdhB xanthine dehydrogenase FAD-binding subunit XdhB Morganella morganii S4
3 group_2770 LHKJJB_08780 84254 85132 1 xdhB xanthine dehydrogenase FAD-binding subunit XdhB Morganella morganii S3
4 group_2770 HKOGLL_08330 84254 85132 1 xdhB xanthine dehydrogenase FAD-binding subunit XdhB Morganella morganii S5
5 group_2770 F4V73_RS13250 277380 278258 1 xdhB xanthine dehydrogenase FAD-binding subunit XdhB Morganella psychrotolerans