PF03448


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03448, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03448
Description MgtE intracellular N domain

Occurence in the database

PF03448 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2190 FBDBKF_16515 31242 32705 -1 mgtE magnesium transporter Morganella morganii S1
1 group_2190 EHELCC_08380 148228 149691 -1 mgtE magnesium transporter Morganella morganii S2
2 group_2190 NLDBIP_08705 148228 149691 -1 mgtE magnesium transporter Morganella morganii S4
3 group_2190 LHKJJB_05560 107468 108931 1 mgtE magnesium transporter Morganella morganii S3
4 group_2190 HKOGLL_05355 132819 134282 -1 mgtE magnesium transporter Morganella morganii S5
5 group_2190 F4V73_RS03035 648293 649756 -1 mgtE magnesium transporter Morganella psychrotolerans
6 group_2190 PMI_RS07700 1680604 1682067 1 mgtE magnesium transporter Proteus mirabilis HI4320