PF03447


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03447, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03447
Description Homoserine dehydrogenase, NAD binding domain

Occurence in the database

PF03447 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1141 FBDBKF_06530 145664 148123 -1 thrA bifunctional aspartate kinase/homoserine dehydrogenase I Morganella morganii S1
1 group_1752 FBDBKF_12210 100550 102982 -1 metL Aspartate kinase Morganella morganii S1
2 group_1141 EHELCC_09575 146236 148695 -1 thrA bifunctional aspartate kinase/homoserine dehydrogenase I Morganella morganii S2
3 group_1752 EHELCC_14095 31723 34155 1 metL Aspartate kinase Morganella morganii S2
4 group_1141 NLDBIP_09955 146236 148695 -1 thrA bifunctional aspartate kinase/homoserine dehydrogenase I Morganella morganii S4
5 group_1752 NLDBIP_15190 35660 38092 1 metL Aspartate kinase Morganella morganii S4
6 group_1141 LHKJJB_07800 68543 71002 1 thrA bifunctional aspartate kinase/homoserine dehydrogenase I Morganella morganii S3
7 group_1752 LHKJJB_15420 100550 102982 -1 metL Aspartate kinase Morganella morganii S3
8 group_1141 HKOGLL_07350 68543 71002 1 thrA bifunctional aspartate kinase/homoserine dehydrogenase I Morganella morganii S5
9 group_1752 HKOGLL_14540 87213 89645 -1 metL Aspartate kinase Morganella morganii S5
10 group_1141 F4V73_RS15400 65446 67905 1 thrA bifunctional aspartate kinase/homoserine dehydrogenase I Morganella psychrotolerans
11 group_1752 F4V73_RS17040 34032 36470 -1 bifunctional aspartate kinase/homoserine dehydrogenase II Morganella psychrotolerans
12 group_1141 PMI_RS00005 337 2796 1 thrA bifunctional aspartate kinase/homoserine dehydrogenase I Proteus mirabilis HI4320
13 group_1752 PMI_RS15945 3538546 3540984 1 bifunctional aspartate kinase/homoserine dehydrogenase II Proteus mirabilis HI4320