PF03253


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03253, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03253
Description Urea transporter

Occurence in the database

PF03253 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2706 FBDBKF_06630 167121 168113 -1 yut urea transporter Morganella morganii S1
1 group_2706 EHELCC_09675 167693 168685 -1 yut urea transporter Morganella morganii S2
2 group_2706 NLDBIP_10055 167693 168685 -1 yut urea transporter Morganella morganii S4
3 group_2706 LHKJJB_07700 48553 49545 1 yut urea transporter Morganella morganii S3
4 group_2706 HKOGLL_07250 48553 49545 1 yut urea transporter Morganella morganii S5
5 group_2706 F4V73_RS15305 46211 47203 1 yut urea transporter Morganella psychrotolerans