PF03167


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03167, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03167
Description Uracil DNA glycosylase superfamily

Occurence in the database

PF03167 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_568 FBDBKF_01485 295609 296307 1 ung uracil-DNA glycosylase Morganella morganii S1
1 group_568 EHELCC_00060 12561 13259 -1 ung uracil-DNA glycosylase Morganella morganii S2
2 group_568 NLDBIP_03400 666877 667575 1 ung uracil-DNA glycosylase Morganella morganii S4
3 group_568 LHKJJB_04915 274118 274816 1 ung uracil-DNA glycosylase Morganella morganii S3
4 group_568 HKOGLL_02130 12766 13464 -1 ung uracil-DNA glycosylase Morganella morganii S5
5 group_568 F4V73_RS01920 420337 421035 -1 ung uracil-DNA glycosylase Morganella psychrotolerans
6 group_568 PMI_RS09370 2044745 2045425 1 ung uracil-DNA glycosylase Proteus mirabilis HI4320