PF02896


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02896, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02896
Description PEP-utilising enzyme, PEP-binding domain

Occurence in the database

PF02896 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1038 FBDBKF_05850 174984 177362 -1 ppsA phosphoenolpyruvate synthase Morganella morganii S1
1 group_1090 FBDBKF_06200 67842 70088 -1 ptsP phosphoenolpyruvate--protein phosphotransferase Morganella morganii S1
2 group_1668 FBDBKF_11595 114004 115728 -1 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI Morganella morganii S1
3 group_1090 EHELCC_09245 68414 70660 -1 ptsP phosphoenolpyruvate--protein phosphotransferase Morganella morganii S2
4 group_1038 EHELCC_11740 4132 6510 1 ppsA phosphoenolpyruvate synthase Morganella morganii S2
5 group_1668 EHELCC_17515 12347 14071 -1 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI Morganella morganii S2
6 group_1090 NLDBIP_09625 68414 70660 -1 ptsP phosphoenolpyruvate--protein phosphotransferase Morganella morganii S4
7 group_1038 NLDBIP_12080 4087 6465 1 ppsA phosphoenolpyruvate synthase Morganella morganii S4
8 group_1668 NLDBIP_18725 13094 14818 -1 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI Morganella morganii S4
9 group_1090 LHKJJB_08130 146578 148824 1 ptsP phosphoenolpyruvate--protein phosphotransferase Morganella morganii S3
10 group_1038 LHKJJB_11940 4132 6510 1 ppsA phosphoenolpyruvate synthase Morganella morganii S3
11 group_1668 LHKJJB_17955 12347 14071 -1 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI Morganella morganii S3
12 group_1090 HKOGLL_07680 146578 148824 1 ptsP phosphoenolpyruvate--protein phosphotransferase Morganella morganii S5
13 group_1038 HKOGLL_10555 4132 6510 1 ppsA phosphoenolpyruvate synthase Morganella morganii S5
14 group_1668 HKOGLL_18695 10160 11884 1 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI Morganella morganii S5
15 group_1038 F4V73_RS03475 739859 742237 1 ppsA phosphoenolpyruvate synthase Morganella psychrotolerans
16 group_1668 F4V73_RS08085 1678392 1680116 1 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI Morganella psychrotolerans
17 group_1090 F4V73_RS15715 144526 146772 1 ptsP phosphoenolpyruvate--protein phosphotransferase Morganella psychrotolerans
18 group_1038 PMI_RS06875 1502191 1504566 -1 ppsA phosphoenolpyruvate synthase Proteus mirabilis HI4320
19 group_1668 PMI_RS09025 1966160 1967887 1 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI Proteus mirabilis HI4320
20 group_1090 PMI_RS11475 2527264 2529510 -1 ptsP phosphoenolpyruvate--protein phosphotransferase Proteus mirabilis HI4320