PF02668


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02668, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02668
Description Taurine catabolism dioxygenase TauD, TfdA family

Occurence in the database

PF02668 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2597 FBDBKF_03175 38808 39641 1 tauD taurine dioxygenase Morganella morganii S1
1 group_2597 EHELCC_07360 207462 208295 -1 tauD taurine dioxygenase Morganella morganii S2
2 group_2597 NLDBIP_07685 207335 208168 -1 tauD taurine dioxygenase Morganella morganii S4
3 group_2597 LHKJJB_07220 171081 171914 -1 tauD taurine dioxygenase Morganella morganii S3
4 group_2597 HKOGLL_03710 61473 62306 1 tauD taurine dioxygenase Morganella morganii S5
5 group_2597 F4V73_RS11745 497496 498323 -1 tauD taurine dioxygenase Morganella psychrotolerans