PF02665


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02665, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02665
Description Nitrate reductase gamma subunit

Occurence in the database

PF02665 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2429 FBDBKF_19640 12264 12941 -1 narI respiratory nitrate reductase subunit gamma Morganella morganii S1
1 group_2429 EHELCC_16930 47491 48168 -1 narI respiratory nitrate reductase subunit gamma Morganella morganii S2
2 group_2429 NLDBIP_17520 7598 8275 1 narI respiratory nitrate reductase subunit gamma Morganella morganii S4
3 group_2429 LHKJJB_17440 7598 8275 1 narI respiratory nitrate reductase subunit gamma Morganella morganii S3
4 group_2429 HKOGLL_17255 7598 8275 1 narI respiratory nitrate reductase subunit gamma Morganella morganii S5
5 group_2429 F4V73_RS10435 200332 201009 -1 narI respiratory nitrate reductase subunit gamma Morganella psychrotolerans
6 group_2429 PMI_RS17780 3905297 3905974 1 narI respiratory nitrate reductase subunit gamma Proteus mirabilis HI4320