PF02625


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02625, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02625
Description XdhC and CoxI family

Occurence in the database

PF02625 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2759 FBDBKF_07705 58366 59982 1 yqeB selenium-dependent molybdenum cofactor biosynthesis protein YqeB Morganella morganii S1
1 group_2759 EHELCC_13535 32560 34176 1 yqeB selenium-dependent molybdenum cofactor biosynthesis protein YqeB Morganella morganii S2
2 group_2759 NLDBIP_13980 53435 55051 1 yqeB selenium-dependent molybdenum cofactor biosynthesis protein YqeB Morganella morganii S4
3 group_2759 LHKJJB_08870 104698 106314 -1 yqeB selenium-dependent molybdenum cofactor biosynthesis protein YqeB Morganella morganii S3
4 group_2759 HKOGLL_08420 104698 106314 -1 yqeB selenium-dependent molybdenum cofactor biosynthesis protein YqeB Morganella morganii S5
5 group_2759 F4V73_RS13395 308560 310176 -1 yqeB selenium-dependent molybdenum cofactor biosynthesis protein YqeB Morganella psychrotolerans