PF02578


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02578, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02578
Description Multi-copper polyphenol oxidoreductase laccase

Occurence in the database

PF02578 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2051 FBDBKF_15365 80967 81713 1 yfiH purine nucleoside phosphorylase YfiH Morganella morganii S1
1 group_2051 EHELCC_10880 3193 3939 -1 yfiH purine nucleoside phosphorylase YfiH Morganella morganii S2
2 group_2051 NLDBIP_11225 3193 3939 -1 yfiH purine nucleoside phosphorylase YfiH Morganella morganii S4
3 group_2051 LHKJJB_11085 3193 3939 -1 yfiH purine nucleoside phosphorylase YfiH Morganella morganii S3
4 group_2051 HKOGLL_09695 3193 3939 -1 yfiH purine nucleoside phosphorylase YfiH Morganella morganii S5
5 group_2051 F4V73_RS12090 3239 4006 -1 yfiH purine nucleoside phosphorylase YfiH Morganella psychrotolerans
6 group_2051 PMI_RS01915 448933 449664 1 yfiH purine nucleoside phosphorylase YfiH Proteus mirabilis HI4320