PF02561


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02561, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02561
Description Flagellar protein FliS

Occurence in the database

PF02561 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_446 FBDBKF_00535 91584 91982 1 fliS flagellar export chaperone FliS Morganella morganii S1
1 group_446 EHELCC_01010 216886 217284 -1 fliS flagellar export chaperone FliS Morganella morganii S2
2 group_446 NLDBIP_02450 462852 463250 1 fliS flagellar export chaperone FliS Morganella morganii S4
3 group_446 LHKJJB_03965 70093 70491 1 fliS flagellar export chaperone FliS Morganella morganii S3
4 group_446 HKOGLL_03080 217091 217489 -1 fliS flagellar export chaperone FliS Morganella morganii S5
5 group_446 F4V73_RS06550 1368928 1369326 1 fliS flagellar export chaperone FliS Morganella psychrotolerans
6 group_446 PMI_RS07925 1737941 1738339 1 fliS flagellar export chaperone FliS Proteus mirabilis HI4320