PF02547


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02547, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02547
Description Queuosine biosynthesis protein

Occurence in the database

PF02547 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2262 FBDBKF_17410 12885 13961 -1 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA Morganella morganii S1
1 group_2262 EHELCC_17305 12885 13961 -1 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA Morganella morganii S2
2 group_2262 NLDBIP_17890 28835 29911 1 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA Morganella morganii S4
3 group_2262 LHKJJB_17810 28833 29909 1 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA Morganella morganii S3
4 group_2262 HKOGLL_17820 28833 29909 1 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA Morganella morganii S5
5 group_2262 F4V73_RS16585 136607 137683 -1 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA Morganella psychrotolerans
6 group_2262 PMI_RS00360 103110 104183 1 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA Proteus mirabilis HI4320