PF02405


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02405, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02405
Description Permease MlaE

Occurence in the database

PF02405 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_728 FBDBKF_03210 44310 45092 -1 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE Morganella morganii S1
1 group_728 EHELCC_07325 202011 202793 1 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE Morganella morganii S2
2 group_728 NLDBIP_07650 201884 202666 1 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE Morganella morganii S4
3 group_728 LHKJJB_07185 165630 166412 1 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE Morganella morganii S3
4 group_728 HKOGLL_03745 66975 67757 -1 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE Morganella morganii S5
5 group_728 F4V73_RS11710 492035 492817 1 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE Morganella psychrotolerans
6 group_728 PMI_RS18190 3992280 3993059 1 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE Proteus mirabilis HI4320