PF02371


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02371, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02371
Description Transposase IS116/IS110/IS902 family

Occurence in the database

PF02371 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3021 FBDBKF_17940 25488 26552 1 IS110 family transposase Morganella morganii S1
1 group_3021 EHELCC_06395 9824 10888 -1 IS110 family transposase Morganella morganii S2
2 group_3021 NLDBIP_06715 9697 10761 -1 IS110 family transposase Morganella morganii S4
3 group_3021 LHKJJB_19315 9608 10672 -1 IS110 family transposase Morganella morganii S3
4 group_3021 HKOGLL_04675 258880 259944 1 IS110 family transposase Morganella morganii S5
5 group_3021 PMI_RS12890 2859139 2860203 1 IS110 family transposase Proteus mirabilis HI4320