PF02371


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF02371
Protein list: lists the 6 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF02371
Description Transposase IS116/IS110/IS902 family

Occurence in the database

PF02371 is associated with 6 different proteins
The 6 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3027 FBDBKF_17940 25488 26552 1 IS110 family transposase Morganella morganii S1
1 group_3027 EHELCC_06395 9824 10888 -1 IS110 family transposase Morganella morganii S2
2 group_3027 NLDBIP_06715 9697 10761 -1 IS110 family transposase Morganella morganii S4
3 group_3027 LHKJJB_19315 9608 10672 -1 IS110 family transposase Morganella morganii S3
4 group_3027 HKOGLL_04675 258880 259944 1 IS110 family transposase Morganella morganii S5
5 group_3027 PMI_RS12890 2859139 2860203 1 IS110 family transposase Proteus mirabilis HI4320