PF02146


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02146, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02146
Description Sir2 family

Occurence in the database

PF02146 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1947 FBDBKF_14615 19395 20261 -1 cobB Sir2 family NAD+-dependent deacetylase Morganella morganii S1
1 group_1947 EHELCC_15420 49471 50337 -1 cobB Sir2 family NAD+-dependent deacetylase Morganella morganii S2
2 group_1947 NLDBIP_15950 49471 50337 -1 cobB Sir2 family NAD+-dependent deacetylase Morganella morganii S4
3 group_1947 LHKJJB_15890 66349 67215 1 cobB Sir2 family NAD+-dependent deacetylase Morganella morganii S3
4 group_1947 HKOGLL_15010 65561 66427 1 cobB Sir2 family NAD+-dependent deacetylase Morganella morganii S5
5 group_1947 F4V73_RS07410 1547632 1548480 -1 cobB Sir2 family NAD+-dependent deacetylase Morganella psychrotolerans
6 group_1947 PMI_RS04325 972138 972995 1 cobB NAD-dependent protein deacylase Proteus mirabilis HI4320