PF02107


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02107, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02107
Description Flagellar L-ring protein

Occurence in the database

PF02107 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_467 FBDBKF_00685 115032 115781 -1 flgH Flagellar basal body L-ring protein FlgH Morganella morganii S1
1 group_467 EHELCC_00860 193087 193836 1 flgH Flagellar basal body L-ring protein FlgH Morganella morganii S2
2 group_467 NLDBIP_02600 486300 487049 -1 flgH Flagellar basal body L-ring protein FlgH Morganella morganii S4
3 group_467 LHKJJB_04115 93541 94290 -1 flgH Flagellar basal body L-ring protein FlgH Morganella morganii S3
4 group_467 HKOGLL_02930 193292 194041 1 flgH Flagellar basal body L-ring protein FlgH Morganella morganii S5
5 group_467 F4V73_RS06695 1391859 1392608 -1 flagellar basal body L-ring protein FlgH Morganella psychrotolerans
6 group_467 PMI_RS08045 1759489 1760232 -1 flagellar basal body L-ring protein FlgH Proteus mirabilis HI4320