PF01914


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01914, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01914
Description MarC family integral membrane protein

Occurence in the database

PF01914 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_269 FBDBKF_05330 72924 73571 -1 marC YchE family NAAT transporter Morganella morganii S1
1 group_3452 FBDBKF_15565 41727 42380 1 marC Small neutral amino acid transporter SnatA, MarC family Morganella morganii S1
2 group_269 EHELCC_12260 107923 108570 1 marC YchE family NAAT transporter Morganella morganii S2
3 group_3452 EHELCC_15925 41027 41680 1 marC Small neutral amino acid transporter SnatA, MarC family Morganella morganii S2
4 group_269 NLDBIP_12600 107878 108525 1 marC YchE family NAAT transporter Morganella morganii S4
5 group_3452 NLDBIP_16445 38983 39636 -1 marC Small neutral amino acid transporter SnatA, MarC family Morganella morganii S4
6 group_269 LHKJJB_12460 107923 108570 1 marC YchE family NAAT transporter Morganella morganii S3
7 group_3452 LHKJJB_16360 41027 41680 1 marC Small neutral amino acid transporter SnatA, MarC family Morganella morganii S3
8 group_269 HKOGLL_11075 107923 108570 1 marC YchE family NAAT transporter Morganella morganii S5
9 group_3452 HKOGLL_16130 41027 41680 1 marC Small neutral amino acid transporter SnatA, MarC family Morganella morganii S5
10 group_269 F4V73_RS05785 1229756 1230403 -1 YchE family NAAT transporter Morganella psychrotolerans
11 group_269 PMI_RS05000 1094021 1094755 -1 MarC family NAAT transporter Proteus mirabilis HI4320
12 group_269 PMI_RS07190 1572584 1573228 -1 YchE family NAAT transporter Proteus mirabilis HI4320