PF01694


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01694, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 19 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01694
Description Rhomboid family

Occurence in the database

PF01694 is associated with 19 different proteins (see tab "Protein list" and "Profile")
The 19 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_681 FBDBKF_02580 214279 214884 -1 glpG Membrane-associated serine protease, rhomboid family Morganella morganii S1
1 group_3265 FBDBKF_06865 36979 37857 -1 glpG Membrane-associated serine protease, rhomboid family Morganella morganii S1
2 group_1621 FBDBKF_10690 106381 107214 -1 glpG rhomboid family intramembrane serine protease GlpG Morganella morganii S1
3 group_681 EHELCC_03050 602099 602704 -1 glpG Membrane-associated serine protease, rhomboid family Morganella morganii S2
4 group_3265 EHELCC_04105 148329 149207 1 glpG Membrane-associated serine protease, rhomboid family Morganella morganii S2
5 group_1621 EHELCC_15025 106371 107204 -1 glpG rhomboid family intramembrane serine protease GlpG Morganella morganii S2
6 group_681 NLDBIP_00410 77432 78037 1 glpG Membrane-associated serine protease, rhomboid family Morganella morganii S4
7 group_3265 NLDBIP_04105 148125 149003 1 glpG Membrane-associated serine protease, rhomboid family Morganella morganii S4
8 group_1621 NLDBIP_14855 106371 107204 -1 glpG rhomboid family intramembrane serine protease GlpG Morganella morganii S4
9 group_681 LHKJJB_01625 314648 315253 -1 glpG Membrane-associated serine protease, rhomboid family Morganella morganii S3
10 group_3265 LHKJJB_09935 148239 149117 1 glpG Membrane-associated serine protease, rhomboid family Morganella morganii S3
11 group_1621 LHKJJB_14490 34522 35355 1 glpG rhomboid family intramembrane serine protease GlpG Morganella morganii S3
12 group_681 HKOGLL_01665 320159 320764 -1 glpG Membrane-associated serine protease, rhomboid family Morganella morganii S5
13 group_3265 HKOGLL_09040 41935 42813 -1 glpG Membrane-associated serine protease, rhomboid family Morganella morganii S5
14 group_1621 HKOGLL_13110 34522 35355 1 glpG rhomboid family intramembrane serine protease GlpG Morganella morganii S5
15 group_681 F4V73_RS05025 1069834 1070472 -1 rhomboid family intramembrane serine protease Morganella psychrotolerans
16 group_1621 F4V73_RS14405 109590 110423 -1 glpG rhomboid family intramembrane serine protease GlpG Morganella psychrotolerans
17 group_1621 PMI_RS14475 3209751 3210590 1 glpG rhomboid family intramembrane serine protease GlpG Proteus mirabilis HI4320
18 group_681 PMI_RS15315 3396723 3397307 -1 rhomboid family intramembrane serine protease Proteus mirabilis HI4320