PF01676


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01676, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01676
Description Metalloenzyme superfamily

Occurence in the database

PF01676 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2312 FBDBKF_17755 11567 12790 -1 deoB phosphopentomutase Morganella morganii S1
1 group_2312 EHELCC_09780 190999 192222 -1 deoB phosphopentomutase Morganella morganii S2
2 group_2312 NLDBIP_10160 190999 192222 -1 deoB phosphopentomutase Morganella morganii S4
3 group_2312 LHKJJB_07595 25016 26239 1 deoB phosphopentomutase Morganella morganii S3
4 group_2312 HKOGLL_07145 25016 26239 1 deoB phosphopentomutase Morganella morganii S5
5 group_2312 F4V73_RS15210 22472 23695 1 deoB phosphopentomutase Morganella psychrotolerans
6 group_2312 PMI_RS11945 2641229 2642455 -1 deoB phosphopentomutase Proteus mirabilis HI4320