PF01472


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01472, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01472
Description PUA domain

Occurence in the database

PF01472 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2028 FBDBKF_15205 51274 52377 1 proB Glutamate 5-kinase Morganella morganii S1
1 group_2028 EHELCC_11040 32529 33632 -1 proB Glutamate 5-kinase Morganella morganii S2
2 group_2028 NLDBIP_11385 32529 33632 -1 proB Glutamate 5-kinase Morganella morganii S4
3 group_2028 LHKJJB_11245 32529 33632 -1 proB Glutamate 5-kinase Morganella morganii S3
4 group_2028 HKOGLL_09855 32529 33632 -1 proB Glutamate 5-kinase Morganella morganii S5
5 group_2028 F4V73_RS12240 32019 33122 -1 proB glutamate 5-kinase Morganella psychrotolerans
6 group_2028 PMI_RS01765 418462 419565 1 proB glutamate 5-kinase Proteus mirabilis HI4320