PF01447


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01447, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01447
Description Thermolysin metallopeptidase, catalytic domain

Occurence in the database

PF01447 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2482 FBDBKF_01030 185942 187042 1 lasB Zn-dependent metalloprotease (Neutral protease B) Morganella morganii S1
1 group_2482 EHELCC_00515 121826 122926 -1 lasB Zn-dependent metalloprotease (Neutral protease B) Morganella morganii S2
2 group_2482 NLDBIP_02945 557210 558310 1 lasB Zn-dependent metalloprotease (Neutral protease B) Morganella morganii S4
3 group_2482 LHKJJB_04460 164451 165551 1 lasB Zn-dependent metalloprotease (Neutral protease B) Morganella morganii S3
4 group_2482 HKOGLL_02585 122031 123131 -1 lasB Zn-dependent metalloprotease (Neutral protease B) Morganella morganii S5
5 group_2482 F4V73_RS07105 1474374 1475492 1 M4 family metallopeptidase Morganella psychrotolerans