PF01293


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01293, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01293
Description Phosphoenolpyruvate carboxykinase

Occurence in the database

PF01293 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1588 FBDBKF_10360 26066 27685 -1 pckA phosphoenolpyruvate carboxykinase (ATP) Morganella morganii S1
1 group_1588 EHELCC_14695 26056 27675 -1 pckA phosphoenolpyruvate carboxykinase (ATP) Morganella morganii S2
2 group_1588 NLDBIP_14525 26056 27675 -1 pckA phosphoenolpyruvate carboxykinase (ATP) Morganella morganii S4
3 group_1588 LHKJJB_14820 114051 115670 1 pckA phosphoenolpyruvate carboxykinase (ATP) Morganella morganii S3
4 group_1588 HKOGLL_13440 114051 115670 1 pckA phosphoenolpyruvate carboxykinase (ATP) Morganella morganii S5
5 group_1588 F4V73_RS14055 22290 23909 -1 pckA phosphoenolpyruvate carboxykinase (ATP) Morganella psychrotolerans
6 group_1588 PMI_RS14915 3309554 3311173 -1 pckA phosphoenolpyruvate carboxykinase (ATP) Proteus mirabilis HI4320