PF01259


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01259, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01259
Description SAICAR synthetase

Occurence in the database

PF01259 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1833 FBDBKF_13570 91827 92540 -1 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase Morganella morganii S1
1 group_1833 EHELCC_08525 182651 183364 1 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase Morganella morganii S2
2 group_1833 NLDBIP_08850 182651 183364 1 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase Morganella morganii S4
3 group_1833 LHKJJB_05415 73795 74508 -1 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase Morganella morganii S3
4 group_1833 HKOGLL_05500 167242 167955 1 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase Morganella morganii S5
5 group_1833 F4V73_RS03195 681756 682469 1 phosphoribosylaminoimidazolesuccinocarboxamide synthase Morganella psychrotolerans
6 group_1833 PMI_RS07610 1660127 1660840 -1 phosphoribosylaminoimidazolesuccinocarboxamide synthase Proteus mirabilis HI4320