PF01156


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01156, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 10 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01156
Description Inosine-uridine preferring nucleoside hydrolase

Occurence in the database

PF01156 is associated with 10 different proteins (see tab "Protein list" and "Profile")
The 10 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3197 FBDBKF_02135 116684 117616 1 Nucleoside hydrolase Morganella morganii S1
1 group_3287 FBDBKF_09055 25839 26789 1 rihB Inosine-uridine nucleoside N-ribohydrolase Morganella morganii S1
2 group_3197 EHELCC_02605 504504 505436 1 Nucleoside hydrolase Morganella morganii S2
3 group_3287 EHELCC_10355 119315 120265 -1 rihB Inosine-uridine nucleoside N-ribohydrolase Morganella morganii S2
4 group_3197 NLDBIP_00855 174700 175632 -1 Nucleoside hydrolase Morganella morganii S4
5 group_3287 NLDBIP_10700 97586 98536 -1 rihB Inosine-uridine nucleoside N-ribohydrolase Morganella morganii S4
6 group_3197 LHKJJB_01180 217053 217985 1 Nucleoside hydrolase Morganella morganii S3
7 group_3287 LHKJJB_10655 92992 93942 1 rihB Inosine-uridine nucleoside N-ribohydrolase Morganella morganii S3
8 group_3197 HKOGLL_01220 222564 223496 1 Nucleoside hydrolase Morganella morganii S5
9 group_3287 HKOGLL_13715 26293 27243 1 rihB Inosine-uridine nucleoside N-ribohydrolase Morganella morganii S5