PF01071


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01071, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01071
Description Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain

Occurence in the database

PF01071 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2305 FBDBKF_17705 35910 37193 -1 purD Phosphoribosylamine-glycine ligase Morganella morganii S1
1 group_2305 EHELCC_18190 35286 36569 -1 purD Phosphoribosylamine-glycine ligase Morganella morganii S2
2 group_2305 NLDBIP_17960 2168 3451 1 purD Phosphoribosylamine-glycine ligase Morganella morganii S4
3 group_2305 LHKJJB_18155 2168 3451 1 purD Phosphoribosylamine-glycine ligase Morganella morganii S3
4 group_2305 HKOGLL_18045 35286 36569 -1 purD Phosphoribosylamine-glycine ligase Morganella morganii S5
5 group_2305 F4V73_RS15085 254596 255879 -1 purD phosphoribosylamine--glycine ligase Morganella psychrotolerans
6 group_2305 PMI_RS13675 3039836 3041125 1 purD phosphoribosylamine--glycine ligase Proteus mirabilis HI4320