PF00923


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00923, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00923
Description Transaldolase/Fructose-6-phosphate aldolase

Occurence in the database

PF00923 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1137 FBDBKF_06510 141246 142199 -1 tal transaldolase B Morganella morganii S1
1 group_1137 EHELCC_09555 141818 142771 -1 tal transaldolase B Morganella morganii S2
2 group_1137 NLDBIP_09935 141818 142771 -1 tal transaldolase B Morganella morganii S4
3 group_1137 LHKJJB_07820 74467 75420 1 tal transaldolase B Morganella morganii S3
4 group_1137 HKOGLL_07370 74467 75420 1 tal transaldolase B Morganella morganii S5
5 group_1137 F4V73_RS15420 71326 72279 1 tal transaldolase Morganella psychrotolerans
6 group_1137 PMI_RS00030 14706 15659 1 tal transaldolase Proteus mirabilis HI4320
7 group_4616 PMI_RS13110 2910786 2911448 -1 fructose-6-phosphate aldolase Proteus mirabilis HI4320