PF00871


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00871, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00871
Description Acetokinase family

Occurence in the database

PF00871 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1905 FBDBKF_14205 38085 39287 1 ackA Acetate kinase Morganella morganii S1
1 group_1905 EHELCC_08075 77698 78900 -1 ackA Acetate kinase Morganella morganii S2
2 group_1905 NLDBIP_08400 77698 78900 -1 ackA Acetate kinase Morganella morganii S4
3 group_1905 LHKJJB_05865 178259 179461 1 ackA Acetate kinase Morganella morganii S3
4 group_1905 HKOGLL_05050 62289 63491 -1 ackA Acetate kinase Morganella morganii S5
5 group_1905 F4V73_RS02725 574566 575768 -1 acetate kinase Morganella psychrotolerans
6 group_1905 PMI_RS08685 1897313 1898515 1 ackA acetate kinase Proteus mirabilis HI4320