PF00731


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00731, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00731
Description AIR carboxylase

Occurence in the database

PF00731 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_918 FBDBKF_04965 198345 198869 1 purE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Morganella morganii S1
1 group_918 EHELCC_06255 257802 258326 1 purE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Morganella morganii S2
2 group_918 NLDBIP_06575 298867 299391 1 purE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Morganella morganii S4
3 group_918 LHKJJB_03455 276391 276915 1 purE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Morganella morganii S3
4 group_918 HKOGLL_06930 198255 198779 1 purE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Morganella morganii S5
5 group_918 F4V73_RS16105 23408 23932 1 purE 5-(carboxyamino)imidazole ribonucleotide mutase Morganella psychrotolerans
6 group_918 PMI_RS10650 2341650 2342171 1 purE 5-(carboxyamino)imidazole ribonucleotide mutase Proteus mirabilis HI4320