PF00545


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF00545
Protein list: lists the 7 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF00545
Description ribonuclease

Occurence in the database

PF00545 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_815 FBDBKF_03310 60865 61332 -1 Ribonuclease Morganella morganii S1
1 group_815 EHELCC_07225 185771 186238 1 Ribonuclease Morganella morganii S2
2 group_815 NLDBIP_07550 185644 186111 1 Ribonuclease Morganella morganii S4
3 group_815 LHKJJB_07085 149390 149857 1 Ribonuclease Morganella morganii S3
4 group_815 HKOGLL_03845 83530 83997 -1 Ribonuclease Morganella morganii S5
5 group_815 F4V73_RS11625 478621 479088 1 ribonuclease domain-containing protein Morganella psychrotolerans
6 group_815 PMI_RS18105 3979500 3980006 1 ribonuclease domain-containing protein Proteus mirabilis HI4320