PF00498


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00498, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00498
Description FHA domain

Occurence in the database

PF00498 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_549 FBDBKF_01315 254352 255620 1 tagH Type VI secretion system-associated FHA domain protein TagH Morganella morganii S1
1 group_549 EHELCC_00230 53248 54516 -1 tagH Type VI secretion system-associated FHA domain protein TagH Morganella morganii S2
2 group_549 NLDBIP_03230 625620 626888 1 tagH Type VI secretion system-associated FHA domain protein TagH Morganella morganii S4
3 group_549 LHKJJB_04745 232861 234129 1 tagH Type VI secretion system-associated FHA domain protein TagH Morganella morganii S3
4 group_549 HKOGLL_02300 53453 54721 -1 tagH Type VI secretion system-associated FHA domain protein TagH Morganella morganii S5
5 group_549 F4V73_RS02355 500407 501666 -1 tagH type VI secretion system-associated FHA domain protein TagH Morganella psychrotolerans
6 group_4064 F4V73_RS06990 1450546 1451460 -1 FHA domain-containing protein Morganella psychrotolerans
7 group_549 PMI_RS03660 823320 824588 -1 tagH type VI secretion system-associated FHA domain protein TagH Proteus mirabilis HI4320