PF00308


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00308, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00308
Description Bacterial DnaA ATPAse domain

Occurence in the database

PF00308 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2083 FBDBKF_15585 47070 48467 -1 dnaA chromosomal replication initiator protein DnaA Morganella morganii S1
1 group_2083 EHELCC_15945 46370 47767 -1 dnaA chromosomal replication initiator protein DnaA Morganella morganii S2
2 group_2083 NLDBIP_16425 32896 34293 1 dnaA chromosomal replication initiator protein DnaA Morganella morganii S4
3 group_2083 LHKJJB_16380 46370 47767 -1 dnaA chromosomal replication initiator protein DnaA Morganella morganii S3
4 group_2083 HKOGLL_16150 46370 47767 -1 dnaA chromosomal replication initiator protein DnaA Morganella morganii S5
5 group_2083 F4V73_RS17575 149565 150974 1 dnaA chromosomal replication initiator protein DnaA Morganella psychrotolerans
6 group_2083 PMI_RS15500 3445820 3447220 1 dnaA chromosomal replication initiator protein DnaA Proteus mirabilis HI4320