PF00213


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00213, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00213
Description ATP synthase delta (OSCP) subunit

Occurence in the database

PF00213 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2069 FBDBKF_15480 20830 21363 1 atpH F0F1 ATP synthase subunit delta Morganella morganii S1
1 group_2069 EHELCC_15840 20130 20663 1 atpH F0F1 ATP synthase subunit delta Morganella morganii S2
2 group_2069 NLDBIP_16530 60000 60533 -1 atpH F0F1 ATP synthase subunit delta Morganella morganii S4
3 group_2069 LHKJJB_16275 20130 20663 1 atpH F0F1 ATP synthase subunit delta Morganella morganii S3
4 group_2069 HKOGLL_16045 20130 20663 1 atpH F0F1 ATP synthase subunit delta Morganella morganii S5
5 group_2069 F4V73_RS17665 175777 176310 -1 atpH F0F1 ATP synthase subunit delta Morganella psychrotolerans
6 group_2069 PMI_RS15160 3363480 3364013 1 atpH F0F1 ATP synthase subunit delta Proteus mirabilis HI4320