PF00166


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00166, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00166
Description Chaperonin 10 Kd subunit

Occurence in the database

PF00166 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_806 FBDBKF_03805 165758 166051 -1 groES Co-chaperonin GroES Morganella morganii S1
1 group_806 EHELCC_06730 81052 81345 1 groES Co-chaperonin GroES Morganella morganii S2
2 group_806 NLDBIP_07055 80925 81218 1 groES Co-chaperonin GroES Morganella morganii S4
3 group_806 LHKJJB_06590 44671 44964 1 groES Co-chaperonin GroES Morganella morganii S3
4 group_806 HKOGLL_04340 188423 188716 -1 groES Co-chaperonin GroES Morganella morganii S5
5 group_806 F4V73_RS11065 350384 350677 1 co-chaperone GroES Morganella psychrotolerans
6 group_806 PMI_RS12580 2788380 2788673 -1 co-chaperone GroES Proteus mirabilis HI4320