PF00137


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00137, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00137
Description ATP synthase subunit C

Occurence in the database

PF00137 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2067 FBDBKF_15470 20049 20288 1 atpE F0F1 ATP synthase subunit C Morganella morganii S1
1 group_2067 EHELCC_15830 19349 19588 1 atpE F0F1 ATP synthase subunit C Morganella morganii S2
2 group_2067 NLDBIP_16540 61075 61314 -1 atpE F0F1 ATP synthase subunit C Morganella morganii S4
3 group_2067 LHKJJB_16265 19349 19588 1 atpE F0F1 ATP synthase subunit C Morganella morganii S3
4 group_2067 HKOGLL_16035 19349 19588 1 atpE F0F1 ATP synthase subunit C Morganella morganii S5
5 group_2067 F4V73_RS17675 176852 177091 -1 atpE F0F1 ATP synthase subunit C Morganella psychrotolerans
6 group_2067 PMI_RS15150 3362696 3362935 1 atpE F0F1 ATP synthase subunit C Proteus mirabilis HI4320