COG5557


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG5557, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Ni/Fe-hydrogenase 2 integral membrane subunit HybB
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG5557 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2405 FBDBKF_19275 2631 3812 1 hybB Ni/Fe-hydrogenase cytochrome b subunit Morganella morganii S1
1 group_2405 EHELCC_07560 249722 250903 1 hybB Ni/Fe-hydrogenase cytochrome b subunit Morganella morganii S2
2 group_2405 NLDBIP_07885 249595 250776 1 hybB Ni/Fe-hydrogenase cytochrome b subunit Morganella morganii S4
3 group_2405 LHKJJB_07420 213341 214522 1 hybB Ni/Fe-hydrogenase cytochrome b subunit Morganella morganii S3
4 group_2405 HKOGLL_03510 18865 20046 -1 hybB Ni/Fe-hydrogenase cytochrome b subunit Morganella morganii S5
5 group_2405 F4V73_RS12035 561341 562522 1 hybB Ni/Fe-hydrogenase cytochrome b subunit Morganella psychrotolerans
6 group_2405 PMI_RS00160 55497 56678 1 hybB Ni/Fe-hydrogenase cytochrome b subunit Proteus mirabilis HI4320