COG5511


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG5511, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 4 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Phage capsid protein
Function(s) descr. Mobilome: prophages, transposons (X)

Occurence in the database

COG5511 is associated with 4 different proteins (see tab "Protein list" and "Profile")
The 4 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3662 FBDBKF_13110 14724 16199 -1 phage portal protein Morganella morganii S1
1 group_3662 EHELCC_19455 2159 3634 -1 phage portal protein Morganella morganii S2
2 group_3662 HKOGLL_05960 243583 245058 1 phage portal protein Morganella morganii S5
3 group_3662 F4V73_RS02095 448664 450145 1 phage portal protein Morganella psychrotolerans