COG5007


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG5007, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Acid stress protein IbaG/YrbA, BolA-like family
Function(s) descr. Signal transduction mechanisms (T)

Occurence in the database

COG5007 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_724 FBDBKF_03190 42319 42573 -1 ibaG BolA family iron metabolism protein IbaG Morganella morganii S1
1 group_724 EHELCC_07345 204530 204784 1 ibaG BolA family iron metabolism protein IbaG Morganella morganii S2
2 group_724 NLDBIP_07670 204403 204657 1 ibaG BolA family iron metabolism protein IbaG Morganella morganii S4
3 group_724 LHKJJB_07205 168149 168403 1 ibaG BolA family iron metabolism protein IbaG Morganella morganii S3
4 group_724 HKOGLL_03725 64984 65238 -1 ibaG BolA family iron metabolism protein IbaG Morganella morganii S5
5 group_724 F4V73_RS11730 494580 494834 1 ibaG BolA family iron metabolism protein IbaG Morganella psychrotolerans
6 group_724 PMI_RS18210 3994738 3994992 1 ibaG BolA family iron metabolism protein IbaG Proteus mirabilis HI4320