COG4967


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4967, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Type IV pilus assembly protein PilV
Function(s) descr. Cell motility (N)
Extracellular structures (W)

Occurence in the database

COG4967 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2701 FBDBKF_06170 63479 63811 -1 pilV Type IV pilus assembly protein PilV Morganella morganii S1
1 group_2701 EHELCC_09215 64051 64383 -1 pilV Type IV pilus assembly protein PilV Morganella morganii S2
2 group_2701 NLDBIP_09595 64051 64383 -1 pilV Type IV pilus assembly protein PilV Morganella morganii S4
3 group_2701 LHKJJB_08160 152855 153187 1 pilV Type IV pilus assembly protein PilV Morganella morganii S3
4 group_2701 HKOGLL_07710 152855 153187 1 pilV Type IV pilus assembly protein PilV Morganella morganii S5
5 group_2701 F4V73_RS15745 150341 150709 1 prepilin-type N-terminal cleavage/methylation domain-containing protein Morganella psychrotolerans