COG4776


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4776, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Exoribonuclease II
Function(s) descr. Transcription (K)

Occurence in the database

COG4776 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_932 FBDBKF_05060 17737 19674 1 rnb exoribonuclease II Morganella morganii S1
1 group_932 EHELCC_12530 161820 163757 -1 rnb exoribonuclease II Morganella morganii S2
2 group_932 NLDBIP_12870 161775 163712 -1 rnb exoribonuclease II Morganella morganii S4
3 group_932 LHKJJB_12730 161820 163757 -1 rnb exoribonuclease II Morganella morganii S3
4 group_932 HKOGLL_11345 161820 163757 -1 rnb exoribonuclease II Morganella morganii S5
5 group_932 F4V73_RS05500 1169120 1171057 1 exoribonuclease II Morganella psychrotolerans
6 group_932 PMI_RS06325 1385905 1387848 1 exoribonuclease II Proteus mirabilis HI4320