COG4774


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4774, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Outer membrane receptor for monomeric catechols
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG4774 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2566 FBDBKF_02720 240426 240983 -1 TonB-dependent receptor-like beta-barrel domain-containing protein Morganella morganii S1
1 group_2566 EHELCC_03190 628246 628803 -1 TonB-dependent receptor-like beta-barrel domain-containing protein Morganella morganii S2
2 group_2566 NLDBIP_00270 51333 51890 1 TonB-dependent receptor-like beta-barrel domain-containing protein Morganella morganii S4
3 group_2566 LHKJJB_01765 340795 341352 -1 TonB-dependent receptor-like beta-barrel domain-containing protein Morganella morganii S3
4 group_2566 HKOGLL_01805 346306 346863 -1 TonB-dependent receptor-like beta-barrel domain-containing protein Morganella morganii S5
5 group_2566 PMI_RS01130 277482 279593 1 TonB-dependent siderophore receptor Proteus mirabilis HI4320