COG4733


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4733, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 11 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Phage-related protein, tail protein J
Function(s) descr. Mobilome: prophages, transposons (X)

Occurence in the database

COG4733 is associated with 11 different proteins (see tab "Protein list" and "Profile")
The 11 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_173 FBDBKF_00035 4358 7492 -1 DUF1983 domain-containing protein Morganella morganii S1
1 group_173 FBDBKF_11510 97237 100746 1 phage tail protein Morganella morganii S1
2 group_173 EHELCC_01510 301376 304510 1 DUF1983 domain-containing protein Morganella morganii S2
3 group_173 NLDBIP_01950 375626 378760 -1 DUF1983 domain-containing protein Morganella morganii S4
4 group_173 LHKJJB_00085 13925 17059 1 DUF1983 domain-containing protein Morganella morganii S3
5 group_173 HKOGLL_00125 19436 22570 1 DUF1983 domain-containing protein Morganella morganii S5
6 group_173 HKOGLL_15295 759 4268 -1 phage tail protein Morganella morganii S5
7 group_173 F4V73_RS02245 471986 475834 1 phage tail protein Morganella psychrotolerans
8 group_173 F4V73_RS18155 71854 75975 -1 phage tail protein Morganella psychrotolerans
9 group_2410 PMI_RS02610 568468 572661 1 DUF1983 domain-containing protein Proteus mirabilis HI4320
10 group_2410 PMI_RS04610 1018441 1021470 1 phage tail protein Proteus mirabilis HI4320