COG4725


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4725, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 5 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description N6-adenosine-specific RNA methylase IME4
Function(s) descr. Translation, ribosomal structure and biogenesis (J)

Occurence in the database

COG4725 is associated with 5 different proteins (see tab "Protein list" and "Profile")
The 5 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3494 FBDBKF_17080 769 1371 1 DNA methyltransferase Morganella morganii S1
1 group_3494 EHELCC_01810 354130 354732 -1 DNA methyltransferase Morganella morganii S2
2 group_3494 NLDBIP_01650 325404 326006 1 DNA methyltransferase Morganella morganii S4
3 group_3494 LHKJJB_00385 66679 67281 -1 DNA methyltransferase Morganella morganii S3
4 group_3494 HKOGLL_00425 72190 72792 -1 DNA methyltransferase Morganella morganii S5