COG4657


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4657, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfA subunit
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG4657 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_925 FBDBKF_05025 10956 11537 1 rsxA electron transport complex subunit RsxA Morganella morganii S1
1 group_925 EHELCC_12565 169957 170538 -1 rsxA electron transport complex subunit RsxA Morganella morganii S2
2 group_925 NLDBIP_12905 169912 170493 -1 rsxA electron transport complex subunit RsxA Morganella morganii S4
3 group_925 LHKJJB_12765 169957 170538 -1 rsxA electron transport complex subunit RsxA Morganella morganii S3
4 group_925 HKOGLL_11380 169957 170538 -1 rsxA electron transport complex subunit RsxA Morganella morganii S5
5 group_925 F4V73_RS05465 1162693 1163274 1 rsxA electron transport complex subunit RsxA Morganella psychrotolerans
6 group_925 PMI_RS06290 1378996 1379577 1 rsxA electron transport complex subunit RsxA Proteus mirabilis HI4320