COG4531


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4531, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ABC-type Zn2+ transport system, periplasmic component/surface adhesin ZnuA
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG4531 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_639 FBDBKF_02085 104760 105674 1 znuA zinc ABC transporter substrate-binding protein ZnuA Morganella morganii S1
1 group_639 EHELCC_02555 492580 493494 1 znuA zinc ABC transporter substrate-binding protein ZnuA Morganella morganii S2
2 group_639 NLDBIP_00905 186642 187556 -1 znuA zinc ABC transporter substrate-binding protein ZnuA Morganella morganii S4
3 group_639 LHKJJB_01130 205129 206043 1 znuA zinc ABC transporter substrate-binding protein ZnuA Morganella morganii S3
4 group_639 HKOGLL_01170 210640 211554 1 znuA zinc ABC transporter substrate-binding protein ZnuA Morganella morganii S5
5 group_639 F4V73_RS04450 940766 941680 1 znuA zinc ABC transporter substrate-binding protein ZnuA Morganella psychrotolerans
6 group_639 PMI_RS05560 1212248 1213192 1 znuA zinc ABC transporter substrate-binding protein ZnuA Proteus mirabilis HI4320