COG4453


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4453, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized conserved protein, DUF1778 family
Function(s) descr. Function unknown (S)

Occurence in the database

COG4453 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3375 FBDBKF_11925 33637 33945 -1 DUF1778 domain-containing protein Morganella morganii S1
1 group_3375 EHELCC_14380 100760 101068 1 DUF1778 domain-containing protein Morganella morganii S2
2 group_3375 NLDBIP_15475 104697 105005 1 DUF1778 domain-containing protein Morganella morganii S4
3 group_3375 LHKJJB_15135 33637 33945 -1 DUF1778 domain-containing protein Morganella morganii S3
4 group_3375 HKOGLL_14255 20300 20608 -1 DUF1778 domain-containing protein Morganella morganii S5
5 group_3835 F4V73_RS06590 1372690 1372962 -1 DUF1778 domain-containing protein Morganella psychrotolerans
6 group_3835 PMI_RS05290 1155196 1155474 1 DUF1778 domain-containing protein Proteus mirabilis HI4320