COG4237


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4237, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Hydrogenase-4 membrane subunit HyfE
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG4237 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_794 FBDBKF_03725 147764 148414 -1 hyfE hydrogenase 4 membrane subunit Morganella morganii S1
1 group_794 EHELCC_06810 98689 99339 1 hyfE hydrogenase 4 membrane subunit Morganella morganii S2
2 group_794 NLDBIP_07135 98562 99212 1 hyfE hydrogenase 4 membrane subunit Morganella morganii S4
3 group_794 LHKJJB_06670 62308 62958 1 hyfE hydrogenase 4 membrane subunit Morganella morganii S3
4 group_794 HKOGLL_04260 170429 171079 -1 hyfE hydrogenase 4 membrane subunit Morganella morganii S5
5 group_794 F4V73_RS11145 369023 369673 1 hyfE hydrogenase 4 membrane subunit Morganella psychrotolerans
6 group_794 PMI_RS12480 2767105 2767755 -1 hyfE hydrogenase 4 membrane subunit Proteus mirabilis HI4320