COG4230


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4230, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Delta 1-pyrroline-5-carboxylate dehydrogenase
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG4230 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_442 FBDBKF_00505 81674 85648 1 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase Morganella morganii S1
1 group_442 EHELCC_01040 223220 227194 -1 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase Morganella morganii S2
2 group_442 NLDBIP_02420 452942 456916 1 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase Morganella morganii S4
3 group_442 LHKJJB_03935 60183 64157 1 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase Morganella morganii S3
4 group_442 HKOGLL_03110 223425 227399 -1 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase Morganella morganii S5
5 group_442 F4V73_RS06515 1357343 1361314 1 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase Morganella psychrotolerans
6 group_442 PMI_RS07895 1727740 1731708 1 putA trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase Proteus mirabilis HI4320