COG4181


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4181, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component
Function(s) descr. Secondary metabolites biosynthesis, transport and catabolism (Q)

Occurence in the database

COG4181 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_204 FBDBKF_12960 93144 93830 -1 ybbA putative ABC transporter ATP-binding protein YbbA Morganella morganii S1
1 group_204 EHELCC_06275 263176 263862 -1 ybbA putative ABC transporter ATP-binding protein YbbA Morganella morganii S2
2 group_204 NLDBIP_06595 304241 304927 -1 ybbA putative ABC transporter ATP-binding protein YbbA Morganella morganii S4
3 group_204 LHKJJB_03475 281765 282451 -1 ybbA putative ABC transporter ATP-binding protein YbbA Morganella morganii S3
4 group_204 HKOGLL_06950 203629 204315 -1 ybbA putative ABC transporter ATP-binding protein YbbA Morganella morganii S5
5 group_204 F4V73_RS16145 33147 33833 -1 ybbA putative ABC transporter ATP-binding protein YbbA Morganella psychrotolerans
6 group_204 PMI_RS10675 2348268 2348954 -1 ybbA putative ABC transporter ATP-binding protein YbbA Proteus mirabilis HI4320